DAGViz

Directed Acyclic Graphs Viewer

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Brief Manual (in Japanese)
 
         
  Evidence   EXP
IDA
IPI IMP IGI IEP ISS ISO ISA    
    ISM
IGC
RCA TAS NAS IC ND IEA NR    
                             
  Aspect biological process molecular function cellular component  
   
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Organisms
KEGG GOA Database
Organisms
KEGG GOA Database    
  Eukaryotes Fungi Candida albicans cal CGD Bacteria Firmicutes Bacillus anthracis Ames ban TIGR    
      Magnaporthe grisea mgr PAMGO     Clostridium perfringens ATCC13124 cpf TIGR    
      Saccharomyces cerevisiae sce SGD Listeria monocytogenes 4b F2365 lmf TIGR    
      Schizosaccharomyces pombe spo Sanger GeneDB Proteobacteria Anaplasma phagocytophilum HZ aph TIGR    
    Protists Dictyostelium discoideum ddi DictyBase     Agrobacterium tumefaciensstr. C58   PAMGO    
      Leishmania major lma Sanger GeneDB     Campylobacter jejuni RM1221 cjr TIGR    
      Plasmodium falciparum pfa Sanger GeneDB     Carboxydothermus hydrogenoformans Z-2901 chy TIGR    
      Trypanosoma brucei tbr Sanger GeneDB     Colwellia psychrerythraea 34H cps TIGR    
    Animals Bos taurus (cow) bta EBI Coxiella burnetii RSA 493 cbu TIGR    
      Caenorhabditis elegans cel WormBase     Escherichia coli eco EcoCyc    
    Danio rerio (zebrafish) dre ZFIN     Ehrlichia chaffeensis Arkansas ech TIGR    
      Drosophila melanogaster dme FlyBase Geobacter sulfurreducens PCA gsu TIGR    
      Gallus gallus (chicken) gga EBI     Hyphomonas neptunium ATCC 15444 hne TIGR    
      Human hsa EBI Methylococcus capsulatus Bath mca TIGR    
      Mus musculus (mouse) mmu MGI     Neorickettsia sennetsu Miyayama nse TIGR    
      Oomycetes   PAMGO    

Pseudomonas aeruginosa PAO1

pae PseudoCAP    
      Rattus norvegicus (rat) rno RGD    

Pseudomonas fluorescens Pf-5

pfl TIGR    
    Plants Arabidopsis thaliana ath TAIR     Pseudomonas syringae DC3000 pst TIGR    
      Oryza sativa osa Gramene     Pseudomonas syringae pv. phaseolicola 1448A psp TIGR    
    Solanaceae   SGN     Shewanella oneidensis MR-1 son TIGR    
  Others Protein Data Bank [multispecies] EBI     Silicibacter pomeroyi DSS-3 sil TIGR    
      UniProt (not release) EBI     Vibrio cholerae vch TIGR    
    Reactome [multispecies] CSHL Green nonsulfur bacteria Dehalococcoides ethenogenes 195 det TIGR    
                     
           
These database are monthly updating (last update 2005 Oct 28)
   
      .